PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027338876.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family MYB
Protein Properties Length: 338aa    MW: 37887.6 Da    PI: 4.7171
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027338876.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.72.3e-171461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +grWT+eEd++l d++++ G g+Wk+ ++  g+ R++k+c++rw +yl
   XP_027338876.1 14 KGRWTAEEDKILTDYIQENGEGSWKSLPKNAGLLRCGKSCRLRWINYL 61
                     79******************************99************97 PP
2Myb_DNA-binding56.37.2e-1867112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg+ T+eE+e++v++++ lG++ W+ Ia +++ gRt++++k++w+++l
   XP_027338876.1  67 RGNITPEEEEIIVKLHAVLGNR-WSVIAGHLP-GRTDNEIKNYWNSHL 112
                      7999******************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MGRAPCCEKV GLKKGRWTAE EDKILTDYIQ ENGEGSWKSL PKNAGLLRCG KSCRLRWINY  60
LRADVKRGNI TPEEEEIIVK LHAVLGNRWS VIAGHLPGRT DNEIKNYWNS HLRRKIYCFM  120
RSLNESLPPI DMAMVNCATS KRRGRGTKIK AAMEEDKSMA LSQNSFESMP SCYREEAEEI  180
SMMDTNYEME GNISSTVASY PIMNGDIEGL GPCQYWSNDE IMKLSLMFEN GVLVNPSGNA  240
SVTLNEEPNG NECGQNVHVG IMGTSQESKI GVWDSSNVES GQWYTSCSSV NSAIDYQGSD  300
WDMAGSVQSY NQWDLCEEDQ MMTCLWGTGI GEINGFHQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49330.12e-78MYB family protein