PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027338549.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family GRAS
Protein Properties Length: 499aa    MW: 55129.6 Da    PI: 4.961
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027338549.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS414.97.1e-1271214851374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlsel.aspdg.dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                     lv+ +++cA+ v+ gdl+ a +l++ ++ l a  +    + ++a yf  AL++r++   +      ++  ++     e+   ++ ++e++P+lkf
  XP_027338549.1 121 LVHMMMTCADSVQRGDLSFAGSLIEGMQGLlAHVNTnCGIGKVAGYFIDALSRRILA--Q------NVFLST---PYENDVLYHHYYEACPYLKF 204
                     6899************************996443332699****************9..2......222222...22333467789********* PP

            GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrled 188
                     +h+taNqaIlea++g+++vH+iDf+++qGlQWpaL+q La Rp+gpp lR+Tg+g+p+++++++l+e+g rLa++A++++v+f f+ ++a rled
  XP_027338549.1 205 AHFTANQAILEAFNGHDCVHVIDFNLMQGLQWPALIQILALRPGGPPLLRLTGIGPPSPDDRDSLREIGLRLAELARSVNVRFAFRGVAAWRLED 299
                     ***************************************************************************************9888**** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrll...desvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklprese 280
                     +++++L+v+p+Ea+aVn+++qlhrll   ++++ + s +d vL  ++sl+Pk+v+vveqea+hn+e Flerf+eal+yys++fdslea      e
  XP_027338549.1 300 VKPWMLQVSPKEAVAVNSIMQLHRLLgseSDPARSGSGIDVVLGWIRSLNPKIVTVVEQEANHNGEGFLERFTEALHYYSTVFDSLEAC---PVE 391
                     *************************93333344455599***********************************************999...467 PP

            GRAS 281 erikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                      ++ + +++l+rei+nvv+cega+r+erhe l+kWrerl++aGF+p++l+++a kqa++ll  ++ +gy vee++g+l+lgW++r+L+++SaW+
  XP_027338549.1 392 PDKALAEMYLQREICNVVCCEGAARVERHEPLAKWRERLGRAGFRPLHLGSNAFKQASMLLTLFSAEGYCVEENQGCLTLGWHSRSLIAASAWQ 485
                     777888999************************************************************************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 499 aa     Download sequence    
MESVSSASNA SSRGSKTREI DDLLAGVGYK VRSSELSQVA QNLERLENVI VNSSTDISQL  60
ASETVLYDPS DIGSWVDTLL SELDQTVSIP YELSQLPQLA TDQSHQLTLV TTVEEDSGIR  120
LVHMMMTCAD SVQRGDLSFA GSLIEGMQGL LAHVNTNCGI GKVAGYFIDA LSRRILAQNV  180
FLSTPYENDV LYHHYYEACP YLKFAHFTAN QAILEAFNGH DCVHVIDFNL MQGLQWPALI  240
QILALRPGGP PLLRLTGIGP PSPDDRDSLR EIGLRLAELA RSVNVRFAFR GVAAWRLEDV  300
KPWMLQVSPK EAVAVNSIMQ LHRLLGSESD PARSGSGIDV VLGWIRSLNP KIVTVVEQEA  360
NHNGEGFLER FTEALHYYST VFDSLEACPV EPDKALAEMY LQREICNVVC CEGAARVERH  420
EPLAKWRERL GRAGFRPLHL GSNAFKQASM LLTLFSAEGY CVEENQGCLT LGWHSRSLIA  480
ASAWQAAPLL DGETLRFDR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14920.11e-146GRAS family protein