PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027337955.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | MYB | ||||||||
Protein Properties | Length: 354aa MW: 39935.1 Da PI: 5.8456 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 42.3 | 1.7e-13 | 14 | 60 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg WT+eEd + + v ++G+ +W++++ + g++R++k+c+ rw + XP_027337955.1 14 RGVWTPEEDPKMLSFVSKHGSSNWTSVPIKAGLKRCGKSCRIRWSNN 60 899*****************************************986 PP | |||||||
2 | Myb_DNA-binding | 44.4 | 3.8e-14 | 68 | 110 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +++Tt+E++l++++++ G++ W+ Ia+ ++ g+t++++k++w++ XP_027337955.1 68 DNFTTQEEDLIIKLHAAIGSR-WSIIAQQIP-GKTDNDVKNYWNT 110 68*******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 354 aa Download sequence |
MVRSPCYEKF NAKRGVWTPE EDPKMLSFVS KHGSSNWTSV PIKAGLKRCG KSCRIRWSNN 60 LKLDLKHDNF TTQEEDLIIK LHAAIGSRWS IIAQQIPGKT DNDVKNYWNT KLKKKLSQMG 120 IDPVTHKPFS KLIADYGNIG ECQKPSTRIG SVNKDFKNAM ILKSEPHQAL PQGFGNFLDQ 180 PKQLLTSPPK EEILGSNFLF NRNHNDIDNF PTQLPHLQAI PIVTSASNGI DFENETILTS 240 LLGEGCLSKT SSPSTSTCFT SGQEELPVPF SWNDFLLEDA FIPPSDNQEE EMVSQVENVM 300 RQSWNMKEVL SQQASTSDVH FSSSSNISFV EAMLDQENEM FLSFPHLMEE PSNY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G56110.1 | 4e-64 | MYB family protein |