PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027337947.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family MYB
Protein Properties Length: 311aa    MW: 35445.8 Da    PI: 6.3194
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027337947.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.81.2e-131358146
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                     +g+W +eEde l++ vk++G+++W++I ++  + Rt+k+c++rw +
   XP_027337947.1 13 KGPWKAEEDEVLLNHVKKYGPRDWSSIRSKGLLQRTGKSCRLRWVN 58
                     79*************************8887799**********87 PP
2Myb_DNA-binding41.33.5e-1369108344
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44 
                      +++ +E+   +++ +q+G++ W++Ia++++ gRt++++k++w
   XP_027337947.1  69 KFSVDEERVVIELQAQFGNR-WAKIASYLP-GRTDNDVKNFW 108
                      7999****************.*********.*********** PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MHGKREQEEY IRKGPWKAEE DEVLLNHVKK YGPRDWSSIR SKGLLQRTGK SCRLRWVNKL  60
RPNLKNGCKF SVDEERVVIE LQAQFGNRWA KIASYLPGRT DNDVKNFWSS RQKRLARILH  120
SSATTPKSQK NKTKVPTFLD IPTLEAPKFC SSSEGEPSSK PQPCSLPCID NSEVIKMVHL  180
PDLIKSELPS SDTSHFEQEF TLYESYKSTE YIAFPQIPEL QNDHTFSMGS QDSYARIDEP  240
SFIEDFGPLD ASEYGIDPQH AIGLPFFDPS GSCRIGTMDT IDSSKNSDSF FDDLPVDMFD  300
HMEPPASRSK L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60460.12e-80MYB family protein