PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027337736.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 404aa MW: 44887.1 Da PI: 8.8414

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027337736.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.6	0.00041	166	189	1	23
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 ++C+ Cg+ F + L++H++t H XP_027337736.1 166 FPCTACGEIFQKPQFLEQHQSTkH 189 89*******************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 404 aa Download sequence
MASIATFFNK FLYLLILLVH LGCFIFTTTT STAAGKQDNR HAPQSKKRKI SPLSQPSSPS 60 HPKFKTHKAL SSSWHFIKHL FSTKSCKTTT ATAQSSPQST ANTTVSAAAA ANSLTTARTS 120 HQSLISLTQP DLFSPDLQRK KPTGPCPESD ISADNNLFFP LRNDIFPCTA CGEIFQKPQF 180 LEQHQSTKHA VSELTGSDPG HNIVQIIFKS GWPETKEFPR VTRILKIHNS PKILSKFEEY 240 RESVKSKATR HGTLTRRRDE RCIADGNELM RFHCATFLCE LGQNGDSSIC SQQFCNICGI 300 IKSGFSPKLD GISTLSTSWR AHVSIPDDVE REFRFMNVKR AMLVCRVIAG RVGSDSDDVE 360 KEDGGFDSVM ARGESGVYTR LDEEELLVFN PRAVLPCFVI VYSV

Sequence ? help Back to Top

Protein Sequence Length: 404 aa Download sequence

MASIATFFNK FLYLLILLVH LGCFIFTTTT STAAGKQDNR HAPQSKKRKI SPLSQPSSPS  60
HPKFKTHKAL SSSWHFIKHL FSTKSCKTTT ATAQSSPQST ANTTVSAAAA ANSLTTARTS  120
HQSLISLTQP DLFSPDLQRK KPTGPCPESD ISADNNLFFP LRNDIFPCTA CGEIFQKPQF  180
LEQHQSTKHA VSELTGSDPG HNIVQIIFKS GWPETKEFPR VTRILKIHNS PKILSKFEEY  240
RESVKSKATR HGTLTRRRDE RCIADGNELM RFHCATFLCE LGQNGDSSIC SQQFCNICGI  300
IKSGFSPKLD GISTLSTSWR AHVSIPDDVE REFRFMNVKR AMLVCRVIAG RVGSDSDDVE  360
KEDGGFDSVM ARGESGVYTR LDEEELLVFN PRAVLPCFVI VYSV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G29660.1	1e-104	C2H2 family protein