PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027337523.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family M-type_MADS
Protein Properties Length: 233aa    MW: 26810.2 Da    PI: 10.4597
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027337523.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF55.67e-181050242
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-T CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifss 42
                    +i n+s r+ tf kR++g++KK +ELS+LC+++++ i++s+
  XP_027337523.1 10 FIANDSARKATFKKRKKGLMKKVSELSTLCGIDACAIVYSP 50
                    899*************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MTRKKVKLAF IANDSARKAT FKKRKKGLMK KVSELSTLCG IDACAIVYSP YDPQPEVWPS  60
PMGVQRVLAK FRRMPELEQS KKMVNQESFL RQRILKAKEQ LKKQRKDNRE KEMTQLMFQY  120
LSAGKIMHNI SMVDLNDLAW LIDQNLKDIN RRIEVLTKNA QSQVQMPPPM VTDGVAKIED  180
KAQGSHGQGF DMNMDLMQKQ NWFINLMNSG GGNDAVSFGD VNHQGFWTNP FFH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1325RKKVKLAFIANDSARKATFKKRK
22226KKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48670.12e-69M-type_MADS family protein