PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027337249.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family GRAS
Protein Properties Length: 526aa    MW: 59915.3 Da    PI: 4.7909
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027337249.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS132.35.2e-411635255374
            GRAS   5 LlecAeavssgdlelaqalLarlselaspdg.dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlta 98 
                     L +  ea+ +g++el++ +   +++ +sp + +p+ Rla+y+ e + ++  +    +y       t+ + s++  aa+++f++  P  k++h++a
  XP_027337249.1 163 LEALGEAMYKGHKELVEVISRCMKQKVSPIAeKPLARLAFYLCEDITTKQGD----CY------LTH-EASKNFEAAFRAFYQGLPHGKVAHFVA 246
                     55666777788888888888888888888777999*****988866655444....54......332.3466778999***************** PP

            GRAS  99 NqaIleavege.ervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg.....skeeleetgerLakfAeelgvpfefnvlvakrle 187
                     N aIlea+ ++ e +Hi+Dfd+++G QWp++++aLa+ ++   +l++T ++  e++     s  ++ee+++ L ++A+++g++++ +    k + 
  XP_027337249.1 247 NLAILEAMPQDvEVIHIVDFDMGEGSQWPPMIEALATLNK---TLKLTSIKWGEESfecasSPWKYEEIRRELFEYARSCGLKLKMEE---KGMG 335
                     **********98899**********************755...6******98777789998999********************9997...5566 PP

            GRAS 188 dl..eleeLrvkp..gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqe..adh..nsesFlerflealeyysalfdsleak 274
                     +l  el++++ ++  gE la n+++   ++   ++ ++    e+L+l+ks   k +v+v     ++   n+ +F   f   l +y al++s+e+ 
  XP_027337249.1 336 ELgsELKRMNKRSgrGEFLAFNCMVGFPHMG--RGRSRRLVMEFLNLIKSCGNKGIVIVGDGrvCEKmkNELEFKPFFDGHLLHYQALLESIESH 428
                     662234444333366***************8..666666689*********999888887765544445999*********************** PP

            GRAS 275 lpres.eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrve.eesgslvlgWkdrp 366
                     +p+    +r+ +E  ++++ ++++   ++ e + +        +   e G++  +l++++ +++k +l+  + s   ++e + +++lvl Wk+ +
  XP_027337249.1 429 FPTCLlYARTAIECLFVAPYVSSLAWLQKWEEIRED------CHLEAEIGLEGCKLNKTILMEVKEMLSGSDgSYQAKIEgHTDNELVLEWKGTQ 517
                     **998899*******99**99999999988833333......3344689*********************9944445555667************ PP

            GRAS 367 LvsvSaWr 374
                     Lv vS+Wr
  XP_027337249.1 518 LVRVSSWR 525
                     *******8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 526 aa     Download sequence    
MMQPEILESP WSSFYLDKSS NFDHQIEHYG FQVDAHMGDS EFNSLFSTPE DTSSEVSSFP  60
IPSKMFINDQ FFHEPLDKDP LQLPTLMDVY DLSVELDDYD LIMRDHQVVG IQGYSKESEG  120
ENSLSNWSPS PSMNSDLSSD QKPLTLPQQG IEIENQVSLP HMLEALGEAM YKGHKELVEV  180
ISRCMKQKVS PIAEKPLARL AFYLCEDITT KQGDCYLTHE ASKNFEAAFR AFYQGLPHGK  240
VAHFVANLAI LEAMPQDVEV IHIVDFDMGE GSQWPPMIEA LATLNKTLKL TSIKWGEESF  300
ECASSPWKYE EIRRELFEYA RSCGLKLKME EKGMGELGSE LKRMNKRSGR GEFLAFNCMV  360
GFPHMGRGRS RRLVMEFLNL IKSCGNKGIV IVGDGRVCEK MKNELEFKPF FDGHLLHYQA  420
LLESIESHFP TCLLYARTAI ECLFVAPYVS SLAWLQKWEE IREDCHLEAE IGLEGCKLNK  480
TILMEVKEML SGSDGSYQAK IEGHTDNELV LEWKGTQLVR VSSWRN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1341347LKRMNKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G08250.13e-16GRAS family protein