PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_027336126.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
|
||||||||
Family | SBP | ||||||||
Protein Properties | Length: 318aa MW: 34906.9 Da PI: 9.1635 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 131.1 | 3.9e-41 | 178 | 255 | 1 | 78 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cq++gC+adls+ak+yhrrhkvCe+hska++v+++gl+qrfCqqCsrfh lsefD++krsCr+rLa+hn+rrrk q+ XP_027336126.1 178 RCQAQGCNADLSDAKHYHRRHKVCEFHSKAATVVAAGLTQRFCQQCSRFHLLSEFDNGKRSCRKRLADHNRRRRKIQQ 255 6**************************************************************************886 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 318 aa Download sequence |
MLDYEWGNPS TIILAGNEGA AATDTDQTHR QIFDHNYTSL SNPFLHGSTL TATPFSHHHH 60 FNPPQPHQHQ HHPFFDPRAF SGASATSFSP SPSMLSLNPI PPISASHCGL GPGSGLGLLL 120 MPKSEDFTPP VDFQASGLGL NLGGRTYFAS CNDDIVNRLC RRAKTVESVP TMLSNLPRCQ 180 AQGCNADLSD AKHYHRRHKV CEFHSKAATV VAAGLTQRFC QQCSRFHLLS EFDNGKRSCR 240 KRLADHNRRR RKIQQPTQEI QKSQPPLDNI ARSSSESGIQ SSSSVKVGLS PPDYFRRSPY 300 QNRGSSTSSS GSLLFSSG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G02065.1 | 8e-70 | SBP family protein |