PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027335908.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

WRKY

Protein Properties

Length: 378aa MW: 42212.3 Da PI: 5.1683

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027335908.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	90	1.9e-28	142	203	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK++ g++fpr+Y+rCt++ gC ++k+v++s+edp + eitY+g+H+++ XP_027335908.1 142 LDDGYSWRKYGQKDILGAKFPRGYFRCTYRnvqGCLATKQVQKSDEDPMIYEITYKGRHTCT 203 59*************************98989************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 378 aa Download sequence
MVDNMKCEQV GLIDELMQGK ELAKQLCDHL VSSSLPSSPS SSSTTTSPPP SSHETNEVLI 60 EKILISYEKA LAMLNWKTTE GERKTKNGSM MDSHCSFTNG SPRSEVQNLE VKHKDVFKKR 120 KTLPRSTDQV KVCSGTPHDG SLDDGYSWRK YGQKDILGAK FPRGYFRCTY RNVQGCLATK 180 QVQKSDEDPM IYEITYKGRH TCTQASHLNK AFPSKAKTGL GENKHQTHQK NQPQQEKIEQ 240 PSETIFSFGS SLEVKMEDLE NKEDIFPSFC FASPSIGSEN EDKNIFSDSM IENNFMESFS 300 PAFISPTTSE SNIFCLSPCY LGSTGLGQSV QTSESDLTDI VSAPTSITNS LIMDFDFILD 360 KFDFDTFFPL NTPELCSS

Sequence ? help Back to Top

Protein Sequence Length: 378 aa Download sequence

MVDNMKCEQV GLIDELMQGK ELAKQLCDHL VSSSLPSSPS SSSTTTSPPP SSHETNEVLI  60
EKILISYEKA LAMLNWKTTE GERKTKNGSM MDSHCSFTNG SPRSEVQNLE VKHKDVFKKR  120
KTLPRSTDQV KVCSGTPHDG SLDDGYSWRK YGQKDILGAK FPRGYFRCTY RNVQGCLATK  180
QVQKSDEDPM IYEITYKGRH TCTQASHLNK AFPSKAKTGL GENKHQTHQK NQPQQEKIEQ  240
PSETIFSFGS SLEVKMEDLE NKEDIFPSFC FASPSIGSEN EDKNIFSDSM IENNFMESFS  300
PAFISPTTSE SNIFCLSPCY LGSTGLGQSV QTSESDLTDI VSAPTSITNS LIMDFDFILD  360
KFDFDTFFPL NTPELCSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46400.1	4e-44	WRKY family protein