PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027335883.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family YABBY
Protein Properties Length: 215aa    MW: 23997.4 Da    PI: 7.5785
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027335883.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY232.97.6e-72111792170
           YABBY   2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkee...lleelkveeenlksnvekeesas 93 
                     d+   seq+Cyv+Cn C+t+lavsvP tslfk+vtvrCGhCt+ll vn++       ++ hl++s+  +   llee+ + + n+ +n+++    s
  XP_027335883.1  11 DHLPPSEQLCYVHCNICDTVLAVSVPCTSLFKTVTVRCGHCTNLLPVNMRGLLLPSHSQFHLGHSFFSPshsLLEEMPNPSPNFLMNQTN---LS 102
                     577899******************************************999999999999*****9888344555555555555555544...44 PP

           YABBY  94 tsvsseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
                     + ++ ++  +   +e+pr+p ++rPPekrqrvPsaynrfik+eiqrik+ nPdi+hreafsaaaknWahfP+ihfgl
  XP_027335883.1 103 AANEFSMPARTVADELPRPPIINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDITHREAFSAAAKNWAHFPHIHFGL 179
                     444444446788999***999******************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
MSSSSTTLSL DHLPPSEQLC YVHCNICDTV LAVSVPCTSL FKTVTVRCGH CTNLLPVNMR  60
GLLLPSHSQF HLGHSFFSPS HSLLEEMPNP SPNFLMNQTN LSAANEFSMP ARTVADELPR  120
PPIINRPPEK RQRVPSAYNR FIKDEIQRIK SVNPDITHRE AFSAAAKNWA HFPHIHFGLM  180
PDQTVKKTNV CQQEGEEVLM KDGFYASANV GVSPY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45190.12e-84YABBY family protein