PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027335482.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 350aa MW: 40405.2 Da PI: 9.9947

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027335482.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.2	1.2e-15	4	53	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqkyl 48 r+rW +eEd ll +v+q+G++ W++++++m+ ++R +k+c +rw +yl XP_027335482.1 4 RQRWKAEEDALLCAYVRQYGPREWNLVSQRMNtpLNRDAKSCLERWKNYL 53 89**********************************************97 PP
2	Myb_DNA-binding	36.5	1.1e-11	59	103	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+ T+eE+ l +++ +++G++ Wk+Ia++++ gRt+k + +w + XP_027335482.1 59 KGSLTEEEQRLVIRLQAKHGNK-WKKIAAEVP-GRTAKRLGKWWEVF 103 6788****************.*****.***999999766 PP

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence
MKERQRWKAE EDALLCAYVR QYGPREWNLV SQRMNTPLNR DAKSCLERWK NYLKPGIKKG 60 SLTEEEQRLV IRLQAKHGNK WKKIAAEVPG RTAKRLGKWW EVFKEKQQRE KQEINKTISP 120 IDDTKYDHIL ETFAEKLVKE HLSQSSYLMA ASNGPFLHTD APAPSALLPP WLSNTNNNPS 180 AIRPPSPSVT LSLSPSTAPP RWLQPERGPG NVTAPHGGSV PAFSDNMVMS ELIECCKELE 240 EGQRAWTAHR KEAAWRLRRV ELQLEAEKTS RRREKVEEIE AKIKALWEEQ NAALDRIEAE 300 YKEQLSGLRK DAEKKEQKLA EQWNAKHMRL VKVMEQVGCR LPRIVEPNGR

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence

MKERQRWKAE EDALLCAYVR QYGPREWNLV SQRMNTPLNR DAKSCLERWK NYLKPGIKKG  60
SLTEEEQRLV IRLQAKHGNK WKKIAAEVPG RTAKRLGKWW EVFKEKQQRE KQEINKTISP  120
IDDTKYDHIL ETFAEKLVKE HLSQSSYLMA ASNGPFLHTD APAPSALLPP WLSNTNNNPS  180
AIRPPSPSVT LSLSPSTAPP RWLQPERGPG NVTAPHGGSV PAFSDNMVMS ELIECCKELE  240
EGQRAWTAHR KEAAWRLRRV ELQLEAEKTS RRREKVEEIE AKIKALWEEQ NAALDRIEAE  300
YKEQLSGLRK DAEKKEQKLA EQWNAKHMRL VKVMEQVGCR LPRIVEPNGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37630.1	1e-135	MYB family protein