PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027335259.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family B3
Protein Properties Length: 310aa    MW: 35481.4 Da    PI: 10.3781
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027335259.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B364.71.4e-2028112898
                     -HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
              B3   8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                     +d+l +g l++p kf++++g+  + s t+ l+ ++g +W+v+l  +k+ g ++++kGWkeFv+ + L  g f+vF++dg+s f  +v +f+
  XP_027335259.1  28 PDTLLHGKLRIPAKFVRKYGE--HLSNTMFLKLSNGTEWKVNL--EKREGNVWFEKGWKEFVECHSLAHGHFLVFRYDGTSHF--HVLIFD 112
                     78888999***********95..4999****************..**********************************9999..999997 PP
2B3452e-14208299598
                     -..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE- CS
              B3   5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvfr 98 
                      ++s +l+++ l+lpk  ++ + ++  + + ++l    ++sW+v+li+ +++++ +++++W+ F+++n+L+ gD ++F+  ++ ++  ++v++ +
  XP_027335259.1 208 IIKSCHLNRKSLYLPKGSLKGYIKP--GVQNVMLL-VGNKSWTVTLIHYQNKSTSYFSANWSAFARENNLEKGDACLFQGLNNgDDIVMKVSISK 299
                     56777889999********988433..33345544.478*******9977777778999********************7766577777777765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MTSGLSHGDG SHGNTTSKPT HFFRIILPDT LLHGKLRIPA KFVRKYGEHL SNTMFLKLSN  60
GTEWKVNLEK REGNVWFEKG WKEFVECHSL AHGHFLVFRY DGTSHFHVLI FDMSTMEIDY  120
PVNKVNRKRA SNSEEIQPHK TRKTNGNNRD ERNSNLQGTA FHQTFRDYKG RLKNSNEMKR  180
NIDLHTERSA ISKCVAREAA RDTSFTMIIK SCHLNRKSLY LPKGSLKGYI KPGVQNVMLL  240
VGNKSWTVTL IHYQNKSTSY FSANWSAFAR ENNLEKGDAC LFQGLNNGDD IVMKVSISKR  300
SSVKPEVVLT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49475.18e-27B3 family protein