PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027334035.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 287aa MW: 31939.1 Da PI: 7.9116

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027334035.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.2	1.4e-16	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEde+lv+ +k+ Gg+ +W++ ++ g+ R++k+c++rw +yl XP_027334035.1 14 KGPWTAEEDEILVNFIKKNGGHgSWRSLPKLAGLLRCGKSCRLRWTNYL 62 79*****************9*******99**********97 PP
2	Myb_DNA-binding	46.9	6.4e-15	68	113	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T eE++l +++++ lG++ W++Ia+ + gRt++++k+ w+++l XP_027334035.1 68 RGPFTLEEEKLVIQLHAILGNR-WAAIASQLA-GRTDNEIKNLWNTHL 113 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 287 aa Download sequence
MGRAPCCDKM GLKKGPWTAE EDEILVNFIK KNGGHGSWRS LPKLAGLLRC GKSCRLRWTN 60 YLRPDIKRGP FTLEEEKLVI QLHAILGNRW AAIASQLAGR TDNEIKNLWN THLKKRLICM 120 GLDPQTHEPL NSSNYPINKT NASISTRHMA QWESARLEAE VRLSRESSLF NNTCSFPHKP 180 DSDYFLRIWN SEIGQSFRDV HKSSDKSSIS LGSCSNKCGS VSATTTDLAS NPVGSSTAAS 240 TVKEGLEWGE RKIGSDSSCS SELEDSCDTS LQLLLDFPIN NDMSFLE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G61250.1	1e-112	MYB family protein