PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027333890.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

LBD

Protein Properties

Length: 289aa MW: 32929.5 Da PI: 6.0681

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027333890.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	115.1	4.6e-36	10	109	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 aCaaC+++rrkC ++C+lapyfpa+qpk f nvhklFG+sn++kllk l+++++++am+s++ +A+ r + Pv+G+ + i +lq q+ +++el+ XP_027333890.1 10 ACAACRYQRRKCIPECPLAPYFPADQPKVFHNVHKLFGVSNIIKLLKILEPSQKKIAMDSIIIQANYRDKYPVHGCWEEICRLQYQIWLVEEELH 104 7*********************************************************************************************9 PP DUF260 96 llkee 100 ++ ++ XP_027333890.1 105 AVYQQ 109 99887 PP

Sequence ? help Back to Top
Protein Sequence Length: 289 aa Download sequence
MTLKGGTTQA CAACRYQRRK CIPECPLAPY FPADQPKVFH NVHKLFGVSN IIKLLKILEP 60 SQKKIAMDSI IIQANYRDKY PVHGCWEEIC RLQYQIWLVE EELHAVYQQL EICRQQHQHQ 120 GPSMPDDVTS QLELGMAPST NNNALPLFNH HTPQPHTYNS VASLSVSQHS YSNSNSVDYN 180 STYLDSKDNN KNPFWVQYPY ANNSSNSVXM QNQSVASQPL AILQGVEDYD EMHPFFDAVD 240 DRQSYIYSKE AYESSSEESV KNTRKCTEHV SENDIVIYAA ACFSLTSVN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47870.1	8e-47	LBD family protein