PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027332788.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | ERF | ||||||||
Protein Properties | Length: 198aa MW: 22454.1 Da PI: 6.7934 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.2 | 8.7e-18 | 5 | 52 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++++GVr+++ +g+Wv+eIr+p ++lg+f taeeAa+a+++a+ + g XP_027332788.1 5 KKFRGVRQRH-WGSWVSEIRHP------LLVWLGTFETAEEAARAYDQAAILMSG 52 59*******9.**********9......*********************987765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 198 aa Download sequence |
MVQSKKFRGV RQRHWGSWVS EIRHPLLVWL GTFETAEEAA RAYDQAAILM SGRNAKTNFP 60 ITQTPEGDPK STNSEDTPST SKDLEEILHA KLRKCGKVPS PSMTCLRLDT ENSHIGVWQK 120 RAGRRSDSNW VMTVQLGKKS GNEGSSEESG NSKLVRSEID EEERIALQMI EELLNDRNCP 180 SPSFNNIQER DHHDSFFL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G15360.1 | 2e-60 | ERF family protein |