PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027332636.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | bHLH | ||||||||
Protein Properties | Length: 190aa MW: 21792.3 Da PI: 9.8778 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 28.8 | 2.2e-09 | 17 | 67 | 6 | 55 |
HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 + +Er+RR +++ ++L +++P+ k+++ ls + L +A YIk+L+ XP_027332636.1 17 KTIERNRRIHMKALCFKLVSIIPSkYLKPTKDMLSQQDQLDLAATYIKHLR 67 689*********************554666666****************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 190 aa Download sequence |
MKNSNITTSD SSKLDRKTIE RNRRIHMKAL CFKLVSIIPS KYLKPTKDML SQQDQLDLAA 60 TYIKHLREKV EKLKGKKEQA MNMIRSTQSN NRIFNIGSQL PQLEIRDLGS GIEVMLISGL 120 NKNFMLYEVI SVLEEEGAEV VTANFSTVAD KIFYTVHAQV KISRVGVEPT RVYQRLQELI 180 APLESWEYIS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G20970.1 | 2e-30 | bHLH family protein |