PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027332609.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 419aa MW: 44808.5 Da PI: 6.2317

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027332609.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	31.1	4.1e-10	270	318	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L+el+P + +k Ka +L + ++Y++sLq XP_027332609.1 270 NSHSLAERVRREKISERMRLLQELVPGC----NKITGKAVMLDEIINYVQSLQ 318 58************************....999***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 419 aa Download sequence
MGGSENAMGF QHGNESILTC PSSGLGANVS EMAISSVSLA KPSDAANPFL AASAWDPLVS 60 LTQAQTFGGS SMVSHSEFAN ANSSYPPLVL ENQGISNTSH LVQYMSDSNL GGMVPKVHSY 120 ASGGFSEMVG GGSFSQHGSG DIANTVYPQH YNPIQEAPIN DEQSHVEDST PEEEAPGSAP 180 SGNRRKRGLD HNSTFGTNKN AESDGVKDSP GKSSDGPKEH EKKPKVEQNS SADLRGKQSV 240 KQTKDNNSQC GEAPKDNFIH VRARRGQATN SHSLAERVRR EKISERMRLL QELVPGCNKI 300 TGKAVMLDEI INYVQSLQQQ VEFLSMKLAT VNPELNFDVE RILSKDILQS RIGHGIGGYG 360 SGISSSHPFP NGSFQGTLAG MPSTSTQYPP LPQTTSSKAS LEWDSILVHH LTTWDPMGG

Sequence ? help Back to Top

Protein Sequence Length: 419 aa Download sequence

MGGSENAMGF QHGNESILTC PSSGLGANVS EMAISSVSLA KPSDAANPFL AASAWDPLVS  60
LTQAQTFGGS SMVSHSEFAN ANSSYPPLVL ENQGISNTSH LVQYMSDSNL GGMVPKVHSY  120
ASGGFSEMVG GGSFSQHGSG DIANTVYPQH YNPIQEAPIN DEQSHVEDST PEEEAPGSAP  180
SGNRRKRGLD HNSTFGTNKN AESDGVKDSP GKSSDGPKEH EKKPKVEQNS SADLRGKQSV  240
KQTKDNNSQC GEAPKDNFIH VRARRGQATN SHSLAERVRR EKISERMRLL QELVPGCNKI  300
TGKAVMLDEI INYVQSLQQQ VEFLSMKLAT VNPELNFDVE RILSKDILQS RIGHGIGGYG  360
SGISSSHPFP NGSFQGTLAG MPSTSTQYPP LPQTTSSKAS LEWDSILVHH LTTWDPMGG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	184	225	RRKRGLDHNSTFGTNKNAESDGVKDSPGKSSDGPKEHEKKPK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10120.1	2e-70	bHLH family protein