PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027332514.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 457aa MW: 49685.1 Da PI: 4.8737

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027332514.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	16.8	1.3e-05	347	384	12	54
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 R +++ +++ L++l+ + +K + a++L +A+eYIk L XP_027332514.1 347 RKEKLGDRITALQQLVSPF-----GKTDTASVLHEAIEYIKFL 384 677888999*****998.....8**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 457 aa Download sequence
MAEEFQAAAV CGENWWNINS ARSVFPLMMS SSSTCSVAAA DAGNYSTWQT DFMDLKGASN 60 NLVSDSFLGF LDAEKAQKSD SASGTGSILI DSPLQMMGFG MSSSTSSNWN QSLLQESSFH 120 SVFQEETGMG GNNSQIQNDW SPKNFSSDGG SQVSTVDAYK PMNQEFSLDQ QSLNSVTSTG 180 LSGGFPVGSA SYGYPSTLIQ SLFDPKPQPQ PQNSLFTNPT MSYSSTTNYG TCSNEPSPTW 240 SKVSSLLKPS MPKQQLSGLH FSNNTPFWNA SAEALNDLRA GVFASSQAQY QTPKFEEKPN 300 CPNTQLNKLK REESPDTTSA TKKNSSEPAF KRPRIETPSP LPTFKVRKEK LGDRITALQQ 360 LVSPFGKTDT ASVLHEAIEY IKFLHDQVSV LSTPYMKNGA PVQQQQGCDN LMDSEGPRQD 420 LRSRGLCLVP ISSTFPVANE TTVDFWTPTF GGTLIGR

Sequence ? help Back to Top

Protein Sequence Length: 457 aa Download sequence

MAEEFQAAAV CGENWWNINS ARSVFPLMMS SSSTCSVAAA DAGNYSTWQT DFMDLKGASN  60
NLVSDSFLGF LDAEKAQKSD SASGTGSILI DSPLQMMGFG MSSSTSSNWN QSLLQESSFH  120
SVFQEETGMG GNNSQIQNDW SPKNFSSDGG SQVSTVDAYK PMNQEFSLDQ QSLNSVTSTG  180
LSGGFPVGSA SYGYPSTLIQ SLFDPKPQPQ PQNSLFTNPT MSYSSTTNYG TCSNEPSPTW  240
SKVSSLLKPS MPKQQLSGLH FSNNTPFWNA SAEALNDLRA GVFASSQAQY QTPKFEEKPN  300
CPNTQLNKLK REESPDTTSA TKKNSSEPAF KRPRIETPSP LPTFKVRKEK LGDRITALQQ  360
LVSPFGKTDT ASVLHEAIEY IKFLHDQVSV LSTPYMKNGA PVQQQQGCDN LMDSEGPRQD  420
LRSRGLCLVP ISSTFPVANE TTVDFWTPTF GGTLIGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61660.1	7e-69	bHLH family protein