PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027332506.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 458aa MW: 49841.2 Da PI: 4.9776

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027332506.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	16.8	1.3e-05	348	385	12	54
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 R +++ +++ L++l+ + +K + a++L +A+eYIk L XP_027332506.1 348 RKEKLGDRITALQQLVSPF-----GKTDTASVLHEAIEYIKFL 385 677888999*****998.....8**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 458 aa Download sequence
MAEEFQAAAV CGENWWNINS ARSVFPLMMS SSSTCSVAAA DAGNYSTWQT DFMDLKGASN 60 NLVSDSFLGF LDAEKAQKSD SASGTGSILI DSPLQMMGFG MSSSTSSNWN QSLLRQESSF 120 HSVFQEETGM GGNNSQIQND WSPKNFSSDG GSQVSTVDAY KPMNQEFSLD QQSLNSVTST 180 GLSGGFPVGS ASYGYPSTLI QSLFDPKPQP QPQNSLFTNP TMSYSSTTNY GTCSNEPSPT 240 WSKVSSLLKP SMPKQQLSGL HFSNNTPFWN ASAEALNDLR AGVFASSQAQ YQTPKFEEKP 300 NCPNTQLNKL KREESPDTTS ATKKNSSEPA FKRPRIETPS PLPTFKVRKE KLGDRITALQ 360 QLVSPFGKTD TASVLHEAIE YIKFLHDQVS VLSTPYMKNG APVQQQQGCD NLMDSEGPRQ 420 DLRSRGLCLV PISSTFPVAN ETTVDFWTPT FGGTLIGR

Sequence ? help Back to Top

Protein Sequence Length: 458 aa Download sequence

MAEEFQAAAV CGENWWNINS ARSVFPLMMS SSSTCSVAAA DAGNYSTWQT DFMDLKGASN  60
NLVSDSFLGF LDAEKAQKSD SASGTGSILI DSPLQMMGFG MSSSTSSNWN QSLLRQESSF  120
HSVFQEETGM GGNNSQIQND WSPKNFSSDG GSQVSTVDAY KPMNQEFSLD QQSLNSVTST  180
GLSGGFPVGS ASYGYPSTLI QSLFDPKPQP QPQNSLFTNP TMSYSSTTNY GTCSNEPSPT  240
WSKVSSLLKP SMPKQQLSGL HFSNNTPFWN ASAEALNDLR AGVFASSQAQ YQTPKFEEKP  300
NCPNTQLNKL KREESPDTTS ATKKNSSEPA FKRPRIETPS PLPTFKVRKE KLGDRITALQ  360
QLVSPFGKTD TASVLHEAIE YIKFLHDQVS VLSTPYMKNG APVQQQQGCD NLMDSEGPRQ  420
DLRSRGLCLV PISSTFPVAN ETTVDFWTPT FGGTLIGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61660.1	1e-72	bHLH family protein