PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_027331892.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 318aa MW: 35702.9 Da PI: 5.1238 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 49.9 | 7.2e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+ Ed++l ++++ +G g+W+ +++ g++R++k+c++rw++yl XP_027331892.1 14 RGSWTAHEDKILTEYIRVHGEGRWRNLPKRAGLRRCGKSCRLRWLNYL 61 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 51.5 | 2.3e-16 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ + +E+el+++++k+lG++ W++Ia +++ gRt++++k++w++ XP_027331892.1 67 RGNISSDEEELIIRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNTN 111 78999*****************.*********.***********986 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 318 aa Download sequence |
MGRSPCCSKE GLNRGSWTAH EDKILTEYIR VHGEGRWRNL PKRAGLRRCG KSCRLRWLNY 60 LRPDIKRGNI SSDEEELIIR LHKLLGNRWS LIAGRLPGRT DNEIKNYWNT NLGKKLKDAQ 120 LPLNGKSTEN PMSQITTTMP LPTTSSSPSL PPPSNVFRTK ATKCSKVLFL NPLPHSSMQL 180 ENNSKEEAEV EATSLLVDTL AANSSLSNQM GKEPGIYDNG FVSFPGEEKE LSTDLLIDFN 240 VDDISLSDLL NSDFSNMCNF GYSDVNNNDL EQLSPCSDQT PMFSDEVLKE WTQSNFSDET 300 NGSNNIHSFT SFLESSEE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G35550.1 | 2e-62 | MYB family protein |