PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027331692.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family MYB
Protein Properties Length: 306aa    MW: 33468.3 Da    PI: 8.0616
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027331692.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.38.5e-09855447
                     S-HHHHHHHHHHHHHTTTT.....-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  4 WTteEdellvdavkqlGgg.....tWktIartmgkgRtlkqcksrwqky 47
                     W+ eE++ + +a++++  +     +W++Ia+ ++  ++ +++k ++q +
   XP_027331692.1  8 WSYEEEKAFENAIALHWIEeaskdQWEKIASAVP-SKSIEEVKQHYQVL 55
                     *****************99***************.************86 PP
2Myb_DNA-binding38.92e-12134178347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ l++ +  ++G+g+W++I+r +   Rt+ q+ s+ qky
   XP_027331692.1 134 PWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKY 178
                      7*****************************99************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MSSSGTIWSY EEEKAFENAI ALHWIEEASK DQWEKIASAV PSKSIEEVKQ HYQVLVEDVS  60
AIEAGHISFP NYATEETTSS NKDFHGSSKA STSDKRSNCN YGSGFSGLGH DSTTHTGKGG  120
LSRSSEQERR KGIPWTEEEH RLFLLGLDKF GKGDWRSISR NFVISRTPTQ VASHAQKYFI  180
RLNSMNRDRR RSSIHDITSV NNGDVVSNQA PITGQHTSTI SSSTMAVGQS MKHRVQPHIP  240
AGLGMYGTPV GHPVAAPPGH MASAVGTPVM LPPGPHPHPH AHPHAHPHPP YVVPLAYPMA  300
PPTMHQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49010.11e-79MYB family protein