PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027331622.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 273aa MW: 29763.3 Da PI: 9.242

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027331622.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	60.2	4.6e-19	12	57	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEde l ++v+ +G+++W++I++ ++ gR++k+c++rw + XP_027331622.1 12 KGPWSPEEDEALQRLVQAHGPRNWSLISKSIP-GRSGKSCRLRWCNQ 57 79****************************.*********985 PP
2	Myb_DNA-binding	55.8	1.1e-17	66	108	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T+eEd+ +++a+ ++G++ W+tIar ++ gRt++ +k++w++ XP_027331622.1 66 PFTPEEDDTIIRAHSRFGNK-WATIARLLN-GRTDNAVKNHWNST 108 89****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 273 aa Download sequence
MASSSKDMDR VKGPWSPEED EALQRLVQAH GPRNWSLISK SIPGRSGKSC RLRWCNQLSP 60 EVEHRPFTPE EDDTIIRAHS RFGNKWATIA RLLNGRTDNA VKNHWNSTLK RKCSAVSSDD 120 RQPLKRSASV GAGYLNPDSP SGSDLSDPGL PALSSPSGSA QVHVSRPIKT QLVETASSAN 180 DPATSLSLSL PGLESGSGSN PVTVAKQASP AAVHNGEERE KQLFNAEFLR VMQEMVRKEV 240 KSYMSEIEQN GLRMHTEAIG NAVVKRMGIS NVE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37260.1	2e-80	MYB family protein