PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027331369.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family ARF
Protein Properties Length: 935aa    MW: 103722 Da    PI: 5.7679
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027331369.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B375.56.3e-24150251199
                     EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 
                     f+k+lt sd++++g +++p++ ae+        +++++ ++l+++d++ ++W++++iyr++++r++lt+GW+ Fv +++L++gD+v+F   ++++
  XP_027331369.1 150 FCKTLTASDTSTHGGFSVPRRAAEKLfppldyTIQPPT-QELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFVGSKRLRAGDSVLFI--RDEK 241
                     99*********************999*****9555555.49************************************************..4577 PP

                     E..EEEEE-S CS
              B3  90 felvvkvfrk 99 
                      +l+v+v+r 
  XP_027331369.1 242 SQLRVGVRRV 251
                     778****985 PP
2Auxin_resp113.52e-37276359183
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                     aahaa+++s+F+++YnPra++seFv++++k++ka+  ++vsvGmRf m+fete+s +rr++Gt+vg+sd+dp+rWp+SkWr+++
  XP_027331369.1 276 AAHAAANRSPFTIFYNPRACPSEFVIPLAKYRKAVFgTHVSVGMRFGMMFETEESGKRRYMGTIVGISDVDPLRWPGSKWRNIQ 359
                     79********************************9889*******************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 935 aa     Download sequence    
MASVEEKIKT VGVGGGLLVG GQTLVAEMKL LKEMQEHSGV RKTLNSELWH ACAGPLVSLP  60
QVGSLVFYFP QGHSEQVAAS TRRTATSQIP NYPNLPSQLL CQVQNVTLHA DKETDEIYAQ  120
MTLQPLNSEK EVFPISDFGL KHSKHPSEFF CKTLTASDTS THGGFSVPRR AAEKLFPPLD  180
YTIQPPTQEL VVRDLHDNTW TFRHIYRGQP KRHLLTTGWS LFVGSKRLRA GDSVLFIRDE  240
KSQLRVGVRR VNRQQTTLPS SVLSADSMHI GVLAAAAHAA ANRSPFTIFY NPRACPSEFV  300
IPLAKYRKAV FGTHVSVGMR FGMMFETEES GKRRYMGTIV GISDVDPLRW PGSKWRNIQV  360
EWDEPGCGDK QNRVSVWEIE TPESLFIFPS LTSSLKRPLQ SGLLENEWGT LLRRPFIRVP  420
ENGTMELSNS IPNLYSEHLM KMLLKPQLIN NNGAFLSVMQ QESAAMRAPL QEMMKTTLAT  480
HTQKVHLACT ENTSLKNLHS QSIPDQPNAL NMQSLLKSDQ PEKLQPLPIG TVTDKSKIES  540
EVLPDHMIDY PSVEGCNIEK VAANPVNQQG LASQLTFHNQ NQNPLLTQSN PWPMQPQLES  600
SIPHPQLIDV GQADSAIVNG LLPQLEIDEW MVYASSQPFA GQNRSTLPLS DLQEHSSLQP  660
QAVNPSLTSV NQEVWDHYVK NLKFLSQSDQ LTSVCQPGLY GLNGMSSSNN LRDLSAESNN  720
QSEICVNVDV SNSVSTTMVD PSTSSTILDE LCTMKDREFQ NPQDCMVGNL SSSQDVQSQI  780
TSASLAESHA FPLRDIADNS GGTSSSHVDF DESSFLQNNS WQQVPAPIRT YTKVQKAGSV  840
GRSIDVTTFK NYEELIRAIE CMFGLDGLLN DTKGSGWKLV YVDYENDVLL VGDDPWEEFV  900
GCVRCIRILS PSEVQQMSEE GMKLLNSGAL QGINV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19850.10.0ARF family protein