PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027331344.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 380aa MW: 40601.4 Da PI: 6.8506

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027331344.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.3	4.9e-12	194	239	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h+++Er RR+ri +++ L+el+P+a K +Ka++L + ++Y+k Lq XP_027331344.1 194 HSIAERLRRERIAERMKALQELVPNA-----NKTDKASMLDEIIDYVKFLQ 239 99*********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 380 aa Download sequence
MQPCSREMQG LNNTIFNSQI QFDPSSNEDF LKQMLSNVPS SSWTLDPIPK PLWDANSDET 60 TPDNVVYPYD EHANLTSKFR NQQITETKAS ALMLHHHLLM SSNSSLFPIP SPNDAVQPSS 120 FKSPTSAGEG SIQALYNGFS GSLQGTPHPS SNQTQHFQHP QGQSFGASGS GGGATPGQPK 180 QRVRARRGQA TDPHSIAERL RRERIAERMK ALQELVPNAN KTDKASMLDE IIDYVKFLQL 240 QVKVLSMSRL GGAAAVAPLV ADMPSEGGGD CVQGKGNGNG ATQAHPRNSN GNQTCSNDSL 300 TMTEQQVAKL MEEDMGSAMQ YLQGKGLCLM PISLATAIST ATCHTRNPLI NPDGPSSPGI 360 SALTVQSAAV VKDAASVSKS

Sequence ? help Back to Top

Protein Sequence Length: 380 aa Download sequence

MQPCSREMQG LNNTIFNSQI QFDPSSNEDF LKQMLSNVPS SSWTLDPIPK PLWDANSDET  60
TPDNVVYPYD EHANLTSKFR NQQITETKAS ALMLHHHLLM SSNSSLFPIP SPNDAVQPSS  120
FKSPTSAGEG SIQALYNGFS GSLQGTPHPS SNQTQHFQHP QGQSFGASGS GGGATPGQPK  180
QRVRARRGQA TDPHSIAERL RRERIAERMK ALQELVPNAN KTDKASMLDE IIDYVKFLQL  240
QVKVLSMSRL GGAAAVAPLV ADMPSEGGGD CVQGKGNGNG ATQAHPRNSN GNQTCSNDSL  300
TMTEQQVAKL MEEDMGSAMQ YLQGKGLCLM PISLATAIST ATCHTRNPLI NPDGPSSPGI  360
SALTVQSAAV VKDAASVSKS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	199	204	RLRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24260.1	8e-68	bHLH family protein