PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027331244.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

HD-ZIP

Protein Properties

Length: 321aa MW: 36010.7 Da PI: 4.4209

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027331244.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	61.8	1.1e-19	86	139	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++++q++ Le+ Fe+++++ e++++LAk lgL+ rqV +WFqNrRa++k XP_027331244.1 86 KKRRLSADQVQFLEKSFEEENKLEPERKTKLAKDLGLQPRQVAIWFQNRRARWK 139 56689************************************************9 PP
2	HD-ZIP_I/II	129.4	1.4e-41	85	177	1	93
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 ekkrrls++qv++LE+sFeee+kLeperK++la++Lglqprqva+WFqnrRAR+ktkqlEkdye+L++++++lk++ ++L ke+++L++e+++ XP_027331244.1 85 EKKRRLSADQVQFLEKSFEEENKLEPERKTKLAKDLGLQPRQVAIWFQNRRARWKTKQLEKDYESLHASFETLKASYDNLLKEKDKLKAEVTS 177 69**************************************************************************************99875 PP

Sequence ? help Back to Top
Protein Sequence Length: 321 aa Download sequence
MAGGRLFSAV PSNASNISLL LHNQTPPPTS DSLFLSTPPS FLGSRSMVSF EDVKGGKGCN 60 RSFFGAFDVD ENGDDGMDEY FHQPEKKRRL SADQVQFLEK SFEEENKLEP ERKTKLAKDL 120 GLQPRQVAIW FQNRRARWKT KQLEKDYESL HASFETLKAS YDNLLKEKDK LKAEVTSLTE 180 KVLARETREG GFKQGESETK GLQEQPEKPL LDSVSEGEGS KVSVGGCKQE DISSARSDIL 240 DSDSPHYTDG VHSALLEAGD SSYVFEPDQS DLSQDEEDNF SQSLLPPYIF PKLEDVDYTD 300 PPESCNFGLT EEDHAIWTWA F

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	86	115	KKRRLSADQVQFLEKSFEEENKLEPERKTK
2	134	142	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01470.1	2e-46	HD-ZIP family protein