PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_Unassigned.433
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family HSF
Protein Properties Length: 411aa    MW: 46624.6 Da    PI: 5.0476
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_Unassigned.433genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind115.53.3e-36151062102
                                           HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTT CS
                          HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekksks 74 
                                           Fl+k+y++++d+++++++sws  +nsfvv+++ +fa+++LpkyFkh+nf+SFvRQLn+YgFkk++ ++     
  evm.model.AsparagusV1_Unassigned.433  15 FLTKTYDMVDDPSTDSIVSWSPANNSFVVWNPPDFARDLLPKYFKHNNFSSFVRQLNTYGFKKIDPDR----- 82 
                                           9********************999*****************************************999..... PP

                                           XTTSEEEEESXXXXXXXXXXXXXXXXXX CS
                          HSF_DNA-bind  75 kekiweFkhksFkkgkkellekikrkks 102
                                               weF++++F +g+++ll++i+r+k 
  evm.model.AsparagusV1_Unassigned.433  83 ----WEFANDEFVRGQRHLLKNIHRRKP 106
                                           ....*********************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 411 aa     Download sequence    
MDSSSHGGSN SPPPFLTKTY DMVDDPSTDS IVSWSPANNS FVVWNPPDFA RDLLPKYFKH  60
NNFSSFVRQL NTYGFKKIDP DRWEFANDEF VRGQRHLLKN IHRRKPVHSH SLQHQGQGSG  120
PLGESERQEL EEEITRLQRE KAILTAELQK HIQQQHGMEN LMQSLEERLL NIELRQKNMM  180
ANLNSYIQRP GFLSNLILPS DLHSKKRRLP KGNLFYDDAD VDENRTTSRD MHMLDTEAFE  240
KMESSLNSLE NFFREVSQAS GGEMYYDNTT VPCAPSAVVI TELNASSGET DANLRSPSPI  300
SSPCIGDIHS SPDLTESTNH MHTEVPNKVS EIDVNSEPAA PETQPKVTTG VNDVFWEQFL  360
TETPGSGDTQ EVQSERREAE DKRVEGVWWN RKNLDHLTEK MGNLTPAEKT *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18880.16e-83HSF family protein