PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_10.648

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

WRKY

Protein Properties

Length: 205aa MW: 23501.2 Da PI: 8.8764

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_10.648	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	100.3	1.2e-31	130	188	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK vk+s +prsY+rCt+++C+vkk+ver +ed ++v++tYeg+H+h evm.model.AsparagusV1_10.648 130 LDDGYKWRKYGQKIVKNSLHPRSYFRCTHHNCRVKKRVERLSEDCRMVITTYEGRHTHA 188 59********************************************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 205 aa Download sequence
MEGRGGPTSR CYVLELPSLS NLEFRQHQPE VNHEGLFSFT VASKEDTLIP FDGHQALANA 60 CNPNSRTWSN EKMRISDPKA GIDQDLSAGR DGGSSSWWKR SGPEKGKTKV RRKMREPRFC 120 FQTRSDVDVL DDGYKWRKYG QKIVKNSLHP RSYFRCTHHN CRVKKRVERL SEDCRMVITT 180 YEGRHTHAPD DDTNSSEPEC FTSF*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44745.1	1e-63	WRKY family protein