PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_10.228
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family NAC
Protein Properties Length: 273aa    MW: 30946.3 Da    PI: 9.2515
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_10.228genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1462e-45111373128
                           NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyW 83 
                                   pG+rFhPt+eel+++yL++ v gkkl+l ++i ++++y+++Pw+Lp+ +k +e+ewyfF+ rd +++t  r++r+tk+g+W
  evm.model.AsparagusV1_10.228  11 PGYRFHPTEEELLNFYLRRMVLGKKLNL-DIIGTIHLYRFDPWELPELAKIGEREWYFFVVRDPRQSTRGRPSRTTKNGFW 90 
                                   9***************************.99***************8888999**************************** PP

                           NAM  84 katgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                                   katgk+++++++   ++l+g kktLvfy grap+g ktdWvm+ey+l
  evm.model.AsparagusV1_10.228  91 KATGKEQPIFNTtgPKHLIGHKKTLVFYMGRAPHGAKTDWVMNEYSL 137
                                   ***********9666777***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
MDESGSELDL PGYRFHPTEE ELLNFYLRRM VLGKKLNLDI IGTIHLYRFD PWELPELAKI  60
GEREWYFFVV RDPRQSTRGR PSRTTKNGFW KATGKEQPIF NTTGPKHLIG HKKTLVFYMG  120
RAPHGAKTDW VMNEYSLPET SSQNPLSTEG IVLCKIYRKA TPMKVLEQRA AMANLDAFAS  180
TTTAGTVSPS ELDRNSRANN LGRVHENELV AKKEEVKKGV EISPVPTPTA RRANLPELEV  240
SGHGLEWHDL VLSTLMSPWM GRWSPVENLF NV*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17040.16e-75NAC family protein