PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_10.1945 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | MYB | ||||||||
Protein Properties | Length: 278aa MW: 31490.2 Da PI: 6.2422 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52 | 1.7e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WTteEd +l +++ +G g+W++ +++ g+ R++k+c++rw +yl evm.model.AsparagusV1_10.1945 14 KGPWTTEEDHILTSYIQTHGYGNWRALPKRAGLLRCGKSCRLRWTNYL 61 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 52.2 | 1.4e-16 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+eE++l+++++++lG++ W++Ia+ ++ Rt++++k+ w+++l evm.model.AsparagusV1_10.1945 67 RGNFTKEEEDLIINLHEKLGNK-WSAIASNLP-SRTDNEIKNVWHTHL 112 89********************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 278 aa Download sequence |
MVRAPCCEKV GLKKGPWTTE EDHILTSYIQ THGYGNWRAL PKRAGLLRCG KSCRLRWTNY 60 LRPDIKRGNF TKEEEDLIIN LHEKLGNKWS AIASNLPSRT DNEIKNVWHT HLKKRANHYI 120 EEPKRKPRRP KSKTSIRVEP KPVTIATSDP STATQTSSIP SSTPTSPGWS HCDISSSFTN 180 ETRNMGASYA FTNNESMDSS SAQDLVEFDE SLLNEALSME NWDDVPMDAK ATAQEQSVLN 240 HFGGELLCSD SFCEDENIDF WLRTFMESVE LHDLPEL* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23250.1 | 8e-70 | MYB family protein |