PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_10.1754
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family B3
Protein Properties Length: 640aa    MW: 71569.7 Da    PI: 6.189
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_10.1754genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B337.34.9e-12411231098
                                    HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
                             B3  10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 
                                     + ++ l +p +fa++ +g    +k++ led+ g++  vkl+   k+g+ ++++GW +F  ++ +  g++v+Fk++g s+
  evm.model.AsparagusV1_10.1754  41 DFGEA-LFIPPTFARTLQGL--INKKIYLEDSAGNRSIVKLS-ATKDGSLIFKQGWHDFILDHSISLGEIVIFKHIGISQ 116
                                    45555.99******999655..5679***************5.5566789**************************9999 PP

                                    E..EEEEE- CS
                             B3  90 felvvkvfr 98 
                                    f  +v+++ 
  evm.model.AsparagusV1_10.1754 117 F--TVQIYG 123
                                    9..777765 PP
2B333.19.8e-115716333397
                                    -SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
                             B3  33 sktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                                     k ++l+d+s r W v +    + + + + +GW++F+ an+L++gD++ ++l+++se +++v++ 
  evm.model.AsparagusV1_10.1754 571 RKVVVLQDPSMRLWPVLY--HESFEFIGFIGGWEDFATANKLQQGDTCQIELVSSSEPTFKVQFS 633
                                    45688999**********..9999999999**********************9887777777765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 640 aa     Download sequence    
MQRACKKCIK KCLRAHGEKP SSSFSSKVSA VPSFFKIMIG DFGEALFIPP TFARTLQGLI  60
NKKIYLEDSA GNRSIVKLSA TKDGSLIFKQ GWHDFILDHS ISLGEIVIFK HIGISQFTVQ  120
IYGTSGSERF QFKGEGNNNK RKRKESKNEA SPNISPLSKA KTNCEASERN HNASDEDAGR  180
NSPIVLSDDD KVMEKLTKDG SNRWVKKSAE NNIENRKKNL IVDKRTTRRC LYATERKSSN  240
VRKEAECEQE IFKIPPGFSW SHKASNEGKT SMNKQAMEVE CTKDMKEDSG LEKNCSVINT  300
SFRDTKANEK KLADQCNSLK RPKLVSRRPK IVSTLDNNNK DEMRTEIDDW AIVTSPLSKE  360
KLSVVEFSQE NNVFMKDQIE KGKPKGDDSS EPNSIEKSEN EAPQEFANED EDENRIVSKE  420
FGNEDSKDEV EVKSDATISL LAPKEDCKAL GAEKEEVTSK GSSLHENGIE APSCSPILNC  480
KDNDQDDLPL LLEGIINDNQ SEGKLELDDK KVSPCSKGEA SEVVKAKEMD PIDSTTVKNT  540
DFSITVSLIS QTWLLLPEKL PACPLRKRCL RKVVVLQDPS MRLWPVLYHE SFEFIGFIGG  600
WEDFATANKL QQGDTCQIEL VSSSEPTFKV QFSSSQNPM*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66980.11e-08B3 family protein