PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_10.1646 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | HSF | ||||||||
Protein Properties | Length: 171aa MW: 20133.8 Da PI: 9.4094 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 106.6 | 1.9e-33 | 13 | 104 | 2 | 101 |
HHHHHHHHHC.TGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEE CS HSF_DNA-bind 2 Flkklyeile.deelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiwe 80 Fl+k+y+++e +++ ++++sw+e+g+ fvv+ +eef++ vLp+yFkh nf+SF+RQLn+YgFkk + ++ we evm.model.AsparagusV1_10.1646 13 FLSKTYDLVEeSRDSNDVVSWNEEGSGFVVWSPEEFSRFVLPRYFKHCNFSSFIRQLNTYGFKKASPDR---------WE 83 9********94558899*************************************************999.........** PP EEESXXXXXXXXXXXXXXXXX CS HSF_DNA-bind 81 FkhksFkkgkkellekikrkk 101 F+h++F+kgk+ ll++i r++ evm.model.AsparagusV1_10.1646 84 FRHEKFQKGKRCLLSDITRRR 104 *******************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 171 aa Download sequence |
MTSLSKLRSL APFLSKTYDL VEESRDSNDV VSWNEEGSGF VVWSPEEFSR FVLPRYFKHC 60 NFSSFIRQLN TYGFKKASPD RWEFRHEKFQ KGKRCLLSDI TRRRCKPSVF PSFLRAREKK 120 SSAAEINENE MLEQNKMLQK ENEELRSQIA YYGELETSLQ KLLSQYVCSR * |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G41690.1 | 8e-41 | HSF family protein |