PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_09.607 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | bHLH | ||||||||
Protein Properties | Length: 223aa MW: 24974.6 Da PI: 6.8902 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 36.7 | 7.6e-12 | 49 | 95 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h +Er+RR++i + +++L ++P + kK +K +iL ++++Y+k+++ evm.model.AsparagusV1_09.607 49 DHILAERKRRENISEQLFTLSMIIPGL-----KKRDKLSILMHTIDYLKQME 95 6899**********************9.....8****************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 223 aa Download sequence |
MLNPPSSSPL PLSKSQQLIC FQTHPSDVEE PEKFADTSKR SRSIDLNQDH ILAERKRREN 60 ISEQLFTLSM IIPGLKKRDK LSILMHTIDY LKQMEEKVKT LEEQASKETV EPSVSTTKSQ 120 LSVASDEGEE SVPSAHSTLP EIEAKISATA VFIRIHCKNR RGVTLKVLGE IEKLHLSVIN 180 SSSLPFSDHF LDINVTAQVE EGFAMTVKDL LKKLNSAFRN FM* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 54 | 59 | ERKRRE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22760.1 | 2e-39 | bHLH family protein |