PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_09.456 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | DBB | ||||||||
Protein Properties | Length: 202aa MW: 22170.3 Da PI: 4.6983 | ||||||||
Description | DBB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 23.1 | 1.6e-07 | 5 | 45 | 5 | 39 |
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39 C+ +e+ ++ C ++ lCe+C +e H H++ evm.model.AsparagusV1_09.456 5 QCDACEKAPAVVICCADEAALCEKCDVEVHAAnklaskHQR 45 7*****************************65667777765 PP | |||||||
2 | zf-B_box | 30.8 | 5.9e-10 | 54 | 87 | 2 | 35 |
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHk 35 + ++C+ ++ek + +fC +++ l+C+dC +++H evm.model.AsparagusV1_09.456 54 KLPRCDICQEKTAFIFCVEDRALFCRDCDETIHV 87 789******************************4 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 202 aa Download sequence |
MMKIQCDACE KAPAVVICCA DEAALCEKCD VEVHAANKLA SKHQRLLLDC LSNKLPRCDI 60 CQEKTAFIFC VEDRALFCRD CDETIHVAGS LSGNHQRYLA TGIRVALSSM CNKDTEKGCH 120 EPPNQNFATL ESKIPITQAS PSSFMNSAWA VDEFLQLSDY ESGDKKEPPV GFGELEWFAD 180 ISLFPEQLPK GTLAAXXXXS Q* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G06040.1 | 6e-78 | DBB family protein |