PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_09.200
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family B3
Protein Properties Length: 631aa    MW: 71601.6 Da    PI: 9.4666
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_09.200genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B347.33.6e-1524112198
                                   EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EE CS
                            B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfv 80 
                                   ffk++     +k + l +p  fa ++ +++   ++t+ l+d+sg+sW+vk+  +   gr  +++GW +Fv ++ +  g+ +
  evm.model.AsparagusV1_09.200  24 FFKIM--IVDFKDH-LFIPPIFACTIgDLV---KQTVFLRDSSGQSWRVKF--SMINGRLAFREGWPDFVLDHSVTLGELL 96 
                                   66666..4555555.9*******9995555...348***************..77777899******************** PP

                                   EEEE-SSSEE..EEEEE- CS
                            B3  81 vFkldgrsefelvvkvfr 98 
                                   vF++ g+s+f   v +f 
  evm.model.AsparagusV1_09.200  97 VFRYRGHSTF--EVEIFG 112
                                   ****998999..888776 PP
2B335.61.6e-115336081491
                                   T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS
                            B3  14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 
                                   +++ lp k  +++g  k++ k + l+d+s r W v +      + + + +GW++F +an+L+egD + F+  + se +
  evm.model.AsparagusV1_09.200 533 SWIKLPVKLPSQFGRAKHSRKIILLRDPSMRLWPVLY--HEDTKFVGFIGGWEHFSRANKLQEGDHCEFEIAEGSEST 608
                                   5666777777677777778889***************..9999999999*********************76545553 PP
Sequence ? help Back to Top
Protein Sequence    Length: 631 aa     Download sequence    
MERKTSDLKN SLVIHEEEEN PSSFFKIMIV DFKDHLFIPP IFACTIGDLV KQTVFLRDSS  60
GQSWRVKFSM INGRLAFREG WPDFVLDHSV TLGELLVFRY RGHSTFEVEI FGTNACIRKN  120
VDVENKENST KSNRKMTEVH HEIQVYNSRK TSDVSKYRRK VAKCDALHKV QKEKSSHRMI  180
GEEINQVSHN IHENKKLVPE KLDADSKESS TKSKREMTEF HREIHVHKKR KISDVSERRC  240
KAKSHDSVDK VRKGKSSCRV TGKEVNRVGH SIHEKRKSVP TKLERAPLKS NYTRALNDAI  300
DEDDAIDEDD EHGAIACPSV PLCASECDRV NKDFLRSHSL EQKCAQNSTE NLINFEEVVG  360
RFLLKEDGVC HIYDEEIMNE TGASVLGPNN MLPSEKENRV CEKEKAAMSK PVIDLTKAKD  420
GNCRSNSKKI RKKPQRKGIL PVVISRVGND VPAKYVGSAS LNASFEKHHK HPHVATGYSC  480
QSGQVLKRVK EEINRCFKGK SIQVKTEPMD GLTLAPPAFA NARFSLSVSA QTSWIKLPVK  540
LPSQFGRAKH SRKIILLRDP SMRLWPVLYH EDTKFVGFIG GWEHFSRANK LQEGDHCEFE  600
IAEGSESTLQ LYSVKARDLV PLSSSKCTEK *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1228255KKRKISDVSERRCKAKSHDSVDKVRKGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34400.13e-13B3 family protein