PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_09.1164 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | ERF | ||||||||
Protein Properties | Length: 228aa MW: 25918.1 Da PI: 10.2356 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 36.9 | 9.3e-12 | 104 | 145 | 3 | 51 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 +GV++ k+ +W A I++ +k+++lg+ g+ eeAa+++++a+ evm.model.AsparagusV1_09.1164 104 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGSQEEAARLYDRAAF 145 79**98..47*********4.....5********************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 228 aa Download sequence |
MVSLRRRRLL GLCSGRNSVP VQLPGSTENG SIMENSNKTV KPFSVHPLPS FILSHQKPTN 60 ISEASFASSN ASASSSSKED TGKKVKRRKR HRRKHYEDQE PCIMRGVYFK NMKWQAAIKV 120 DKKQIHLGTV GSQEEAARLY DRAAFMCGRE PNFELSEEEK RELSQYKWEE FLTLTRNAIN 180 IKKHQRRIGV RGRPRKTEVQ NSNYDPERGT GVSSMSDDDE DEETSAT* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 83 | 89 | KKVKRRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G13040.1 | 5e-47 | ERF family protein |