PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_08.708

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

CPP

Protein Properties

Length: 364aa MW: 39666.8 Da PI: 5.4361

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_08.708	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	25.7	2.3e-08	173	208	3	40
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 +k C+Ck Clk+YC+Cf+++ +C + C+C +C+N++ evm.model.AsparagusV1_08.708 173 SKYCTCKA-LCLKRYCRCFSQNYYCRD-CSCVGCFNSS 208 789*75.7*************.******86 PP
2	TCR	40.2	6.8e-13	239	274	3	38
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkN 38 + +CnC+ks+C k YCeC++ g Cs +C+C +C+N evm.model.AsparagusV1_08.708 239 NTRCNCTKSHCRKHYCECYNVGIGCSLNCRCAGCQN 274 578********************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 364 aa Download sequence
MGSNSTAEDF NNGDINPLPL EFDAGFLDYV SSAPPPMDSD MLTDSHVNGD FFGDALAPGS 60 FESSITGQAV PFNNINNVAS YVQSPPASFI NAHEARVGLS PGKIQREAQQ ERQAYQPPMN 120 VNRFNSISPM RTTDSYAAPR DSKSLLEDSG SYDDPTGESN KSNRGNALPN NASKYCTCKA 180 LCLKRYCRCF SQNYYCRDCS CVGCFNSSGY EDSVRMAHED IKLRDFKMGK QIASSSGMNT 240 RCNCTKSHCR KHYCECYNVG IGCSLNCRCA GCQNFYGKRQ GTEPIIQREN GSGRRDSTGG 300 RTVFGSSEMI RQQLISSTMK NGQIVVNDNQ LSSIVPETLT PGSGSEQSDL IQGPSDVSDE 360 YLN*

Sequence ? help Back to Top

Protein Sequence Length: 364 aa Download sequence

MGSNSTAEDF NNGDINPLPL EFDAGFLDYV SSAPPPMDSD MLTDSHVNGD FFGDALAPGS  60
FESSITGQAV PFNNINNVAS YVQSPPASFI NAHEARVGLS PGKIQREAQQ ERQAYQPPMN  120
VNRFNSISPM RTTDSYAAPR DSKSLLEDSG SYDDPTGESN KSNRGNALPN NASKYCTCKA  180
LCLKRYCRCF SQNYYCRDCS CVGCFNSSGY EDSVRMAHED IKLRDFKMGK QIASSSGMNT  240
RCNCTKSHCR KHYCECYNVG IGCSLNCRCA GCQNFYGKRQ GTEPIIQREN GSGRRDSTGG  300
RTVFGSSEMI RQQLISSTMK NGQIVVNDNQ LSSIVPETLT PGSGSEQSDL IQGPSDVSDE  360
YLN*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22780.1	1e-24	CPP family protein