PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_08.396
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family HB-other
Protein Properties Length: 255aa    MW: 28469.1 Da    PI: 7.4393
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_08.396genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox68.58.2e-2294149156
                                   TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
                      Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                                   +++ +++t++q++eLe+lF+++++p++++r eL+k+l L+ rqVk+WFqNrR+++k
  evm.model.AsparagusV1_08.396  94 KKRYHRHTPQQIQELEALFKECPHPDEKQRLELSKRLCLESRQVKFWFQNRRTQMK 149
                                   688999***********************************************999 PP
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
MWQLKGDVGK LEAVCELEVI EDDLRQTNVE GQGEMSRIGI IGGGGGNSVS LSAGDVNTAQ  60
NKRDEDDSRS GSDNLARCQL RRTHLEQENN PRKKKRYHRH TPQQIQELEA LFKECPHPDE  120
KQRLELSKRL CLESRQVKFW FQNRRTQMKT QIERHENSIL KQENDKLRAE NMSIKEAMRN  180
PICGNCGGPA ILGEVSLEEQ HLRIENARLK DELDRVCALA GKFLGRPMPS LSSSLDLAVG  240
TNGFAAVAPT LGGS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00730.21e-92HD-ZIP family protein