PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_08.3570 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | MYB_related | ||||||||
Protein Properties | Length: 233aa MW: 26568.4 Da PI: 11.8672 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 48.8 | 1.6e-15 | 85 | 129 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE++l++ + k++G+g+W+ I+r + +Rt+ q+ s+ qky evm.model.AsparagusV1_08.3570 85 PWTEEEHKLFLMGLKKYGKGDWRNISRNFVVTRTPTQVASHAQKY 129 8*******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 233 aa Download sequence |
MGEGGGRAPW QVRQRRHLSL PRPRRRRGPY RSGPDTVPWL QLVVVHVGLG ERVRWDEAIL 60 LRRREEIRRQ AXXXXSDQER KKGVPWTEEE HKLFLMGLKK YGKGDWRNIS RNFVVTRTPT 120 QVASHAQKYF IRLNSGGKDK RRASIHDITT VNLPDGSPPS PSQSSSAVAR GRSDQFSMAV 180 DSEQHREPAA GFSPLKHGNL PYRQXXXXXX XAQTPHRSTL RDSMVAHRAM LI* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G58900.1 | 5e-47 | MYB_related family protein |