PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_08.3506 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | WOX | ||||||||
Protein Properties | Length: 213aa MW: 23779.5 Da PI: 4.9003 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 61.4 | 1.3e-19 | 18 | 77 | 3 | 57 |
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++tk+q+ +Le+l+++ r+ps+e++++++++l + ++V++WFqN++a++++ evm.model.AsparagusV1_08.3506 18 SRWNPTKDQIAILESLYRQgLRTPSTEQIQQITARLrefgTTEGKNVFYWFQNHKARQRQ 77 7*****************99*******************99999**************97 PP | |||||||
2 | Wus_type_Homeobox | 111.9 | 3.5e-36 | 17 | 78 | 3 | 64 |
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 +RW+Pt++Qi iLe+ly++GlrtP++e+iq+ita+L+e+G e+kNVfyWFQN+kaR+rq+ evm.model.AsparagusV1_08.3506 17 GSRWNPTKDQIAILESLYRQGLRTPSTEQIQQITARLREFGTTEGKNVFYWFQNHKARQRQR 78 68***********************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 213 aa Download sequence |
MEPNSSSSSA SASAASGSRW NPTKDQIAIL ESLYRQGLRT PSTEQIQQIT ARLREFGTTE 60 GKNVFYWFQN HKARQRQRMK QESYYILKTS LIIVVCGPYC LPVTQGGAHV GLYPNMFMSR 120 PVPVSPIEQN QLQRINEQRL ANENNGNYTN GDDIETLQLF PLHPTGILEA HERSECPLIA 180 SASTVEPDQG VEEEDEGSEN NNVPPLMFNF FG* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G59340.1 | 3e-32 | WOX family protein |