PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_08.3344

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

WRKY

Protein Properties

Length: 239aa MW: 26946.2 Da PI: 6.843

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_08.3344	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	84.9	7.6e-27	90	151	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK ++ s+fpr Y+rCt++ gC+++++v++s+edp++++itY geH+++ evm.model.AsparagusV1_08.3344 90 LDDGYSWRKYGQKGIHRSKFPRCYFRCTHKhdqGCKATRQVQQSEEDPSLFIITYFGEHTCK 151 59*************************99999************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 239 aa Download sequence
MSSSNNQDTA IEELVKGREL AGQLGALLEQ NHDLGSIVEE ILGVFSRALM FMDSAAEING 60 RRRKIRSTMT GGCQRRPRSR SHTMIKVKSL DDGYSWRKYG QKGIHRSKFP RCYFRCTHKH 120 DQGCKATRQV QQSEEDPSLF IITYFGEHTC KHPIDFASTR VEEENPCIIS FASDAKFDAN 180 LKQPKIPPLS PEHSGEGHVS NIPTMEGSGG HGDVRSCVDN WWWDFMEEAF DFDGLLSF*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	61	88	RRRKIRSTMTGGCQRRPRSRSHTMIKVK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56400.1	8e-32	WRKY family protein