PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_08.3342
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family WRKY
Protein Properties Length: 232aa    MW: 26138.1 Da    PI: 5.6769
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_08.3342genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY38.72e-12781231759
                                    T-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                           WRKY  17 gsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                                    g +  +sYYrCt++   +C+++k v+++++d ++++++Y+++H+++
  evm.model.AsparagusV1_08.3342  78 GGQKRKSYYRCTHSddqKCQATKLVQQEDDDSQLFKVIYSNKHTCN 123
                                    567789*******99999**************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
MASKFSMRSA IEEINRGKNL MNLLYPHLQQ HTEATELSKG IQQAFESALA ILKEAEPKIV  60
SGKKRRRPEV NSDDRKEGGQ KRKSYYRCTH SDDQKCQATK LVQQEDDDSQ LFKVIYSNKH  120
TCNDTMLDNS PQIIVTSPSK ESNFFIFESK SSYSKSNNIS KKDHKDSSEE KCSLESEICS  180
SLTMNSAMKE KTEEDSSITS IFSDFPSSPS SQHDPCGINF DDIDDILNLI V*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23810.11e-11WRKY family protein