PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_08.3116 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | B3 | ||||||||
Protein Properties | Length: 180aa MW: 20285.3 Da PI: 10.1001 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 38.5 | 2e-12 | 75 | 166 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfv 80 f ++ ++ v+ lv+p+ f + +++s++++l+ +g++W+ k+ +++ + +GW++F+ +n+Lk+gD + evm.model.AsparagusV1_08.3116 75 FTSIVVKTQVTDPFSLVIPRCFRRFL---PNSSVDVVLYC-RGKRWKAKY--SGQLTLKRINTGWRDFALDNKLKVGDGC 148 5566777888888999***9997544...34788999877.9********..6666556689****************** PP EEEE-SSSEE..EEEEE- CS B3 81 vFkldgrsefelvvkvfr 98 v +l++ ++ e++v++++ evm.model.AsparagusV1_08.3116 149 VYELMDCNKLEFRVQILQ 166 ***997799999999876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 180 aa Download sequence |
MKNPSRCGSS TPALCQVPLQ DQNFFTQSSC DFSADAKNER SRNSSKTPES KMRRAPLRTS 60 CKRDRIAPLS GNPYFTSIVV KTQVTDPFSL VIPRCFRRFL PNSSVDVVLY CRGKRWKAKY 120 SGQLTLKRIN TGWRDFALDN KLKVGDGCVY ELMDCNKLEF RVQILQGEVP TMSTQDLVG* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G58280.1 | 2e-07 | B3 family protein |