PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_08.2954 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | NAC | ||||||||
Protein Properties | Length: 252aa MW: 29094.8 Da PI: 9.9656 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 170.4 | 5.7e-53 | 104 | 233 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk....leleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr 76 lppGfrFhP+deelv++yL+kk++g+k + + ++ +vd++k+ePwdLp+ + + kewyf+s rd+kyatg+r+nr evm.model.AsparagusV1_08.2954 104 LPPGFRFHPRDEELVCDYLTKKISGDKsgslFGC-PTMIDVDLNKCEPWDLPEIACVGGKEWYFYSLRDRKYATGQRTNR 182 79***********************996554333.358999***********7666689********************* PP NAM 77 atksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 at sgyWkatgkd++v++ +g lvg++ktLvfy+grapkg+ktdWvmhe+r+ evm.model.AsparagusV1_08.2954 183 ATVSGYWKATGKDRHVTR-RGVLVGMRKTLVFYRGRAPKGRKTDWVMHEFRM 233 *****************9.99*****************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 252 aa Download sequence |
MTMLWPMNGT VISWFQLRSG LISYRSRPTY LMQTLWLFAD LGLTDDPLLQ HELGGCWPYV 60 HVSSMPSKQR HLTFLVLSFI DLSRSLVHIH LIRMSYLNMM EARLPPGFRF HPRDEELVCD 120 YLTKKISGDK SGSLFGCPTM IDVDLNKCEP WDLPEIACVG GKEWYFYSLR DRKYATGQRT 180 NRATVSGYWK ATGKDRHVTR RGVLVGMRKT LVFYRGRAPK GRKTDWVMHE FRMEVSDDKS 240 KFSVKLNVGG L* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G12977.1 | 2e-72 | NAC family protein |