PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_08.278 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | MYB | ||||||||
Protein Properties | Length: 300aa MW: 33791.6 Da PI: 6.3672 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.3 | 6.3e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEde+l++++ +G g+W+ ++++ g+ R++k+c++rw +yl evm.model.AsparagusV1_08.278 14 RGLWSPEEDEKLIRYISTHGYGCWSEVPEKAGLQRCGKSCRLRWINYL 61 788*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 57.1 | 4.3e-18 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr+T+eE++l++ ++++ G++ W+ Ia++++ gRt++++k++w+++ evm.model.AsparagusV1_08.278 67 RGRFTQEEEKLIISLHAMVGNR-WAHIASHLP-GRTDNEIKNYWNSW 111 89********************.*********.************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 300 aa Download sequence |
MGHHSCCNQQ KVKRGLWSPE EDEKLIRYIS THGYGCWSEV PEKAGLQRCG KSCRLRWINY 60 LRPDIRRGRF TQEEEKLIIS LHAMVGNRWA HIASHLPGRT DNEIKNYWNS WIKKKIRKPT 120 TPSSTSPPSA ELINPSYNSN NQFDAFTSQN MPPASATSHQ DAIFPYHCPL FMFDTSIGDH 180 NNGGNIGLSS EVWNPNIQHQ DQAVHNSFFA YNTSSMDSNY LPPLVDGMAG MVQIGEDGDP 240 INRECFEKQD VSGWVETQNY PSLLIWEQIQ GELVGDHDLS STTSSNIERM AAGSFPSSQ* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G63910.1 | 5e-86 | MYB family protein |