PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_08.2693
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family B3
Protein Properties Length: 473aa    MW: 53894.8 Da    PI: 6.5282
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_08.2693genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B347.43.5e-15369454396
                                    EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEE CS
                             B3   3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvF 82 
                                      +  s+v++  +++lp kf++e+   ++ + +++lede+g ++ v++   +++  + +++GW++F+ a+ L+ gD++vF
  evm.model.AsparagusV1_08.2693 369 RSMALSHVSSCFWISLPTKFCKENL--PALDLKMILEDERGSEYAVNY--FGSR--TAFSGGWRGFALAHTLELGDTLVF 442
                                    556668999999**********994..456789***************..6666..5599******************** PP

                                    EE-SSSEE..EEEE CS
                             B3  83 kldgrsefelvvkv 96 
                                    +l + ++f  ++ +
  evm.model.AsparagusV1_08.2693 443 ELLEPTRF--KIYI 454
                                    *9876666..5555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 473 aa     Download sequence    
MGDDGSPSVP LPQSSDHPTK NKIMGDDGSP SVLRHNIIEL ELKLEEEKDR YRDLKSHLKL  60
SKLAASQEID NQRRVCLMQR EVMARLQEDN KTLREREARD QETLKCLLEE MAKKDRDFRE  120
KLLEFECGEK RAQCEVLEWK SKYCELEARV SRLIGETVAG FERKEREIQE KIFELAEENR  180
NLKIRALMVS EGNCYYDFKG KEINVEENPR PIEKEKERTS EIGEEDEDEV PLSHLIKKRL  240
ADASHSSKEF FASQKPSEPG RNGGKRVPSG GEDVHTPLES AIKQQQESNI VSNSRKTFKL  300
TDLSSSVSAR NPGSTGFNGV VQRGDQSYSK STGNPRVYTG RTPTLEQPKH AEKRAQVLQR  360
SLRTPSFIRS MALSHVSSCF WISLPTKFCK ENLPALDLKM ILEDERGSEY AVNYFGSRTA  420
FSGGWRGFAL AHTLELGDTL VFELLEPTRF KIYIIKAISQ ETCEEFDHRI TG*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58280.15e-29B3 family protein