PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_08.1329

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

Protein Properties

Length: 519aa MW: 60399.3 Da PI: 9.4724

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_08.1329	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	52.3	1e-16	13	104	1	94
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT- CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegD 78 ffk + ++++ l +p f++e+ ++ + +t tl +++g+sW+v + y kk+ +y+ ++GW +Fv+a++L +g evm.model.AsparagusV1_08.1329 13 FFKPM--LPGFSKK-LAIPTAFVREIVKERCNVRTSTLVNPNGKSWRVDV-YedHKKDYMYFSGNGWLRFVRAHKLGVGY 88 66666..5566665.9********6555566799**********.6455555569999************ PP EEEEEE-SSSEE..EE CS B3 79 fvvFkldgrsefelvv 94 fvvF ++g++ f+++v evm.model.AsparagusV1_08.1329 89 FVVFCYKGNMVFKFRV 104 ******99996555 PP

Sequence ? help Back to Top
Protein Sequence Length: 519 aa Download sequence
MMRKNGGPGN MHFFKPMLPG FSKKLAIPTA FVREIVKERC NVRTSTLVNP NGKSWRVDVY 60 EDHKKDYMYF SGNGWLRFVR AHKLGVGYFV VFCYKGNMVF KFRVYDLSAC EITSYASSDA 120 PRENFYNNKK KTNNENEKKK MKEKITVINV EEDEENFEDD DGDEVTESIE KRKKQQLKKI 180 SEVKFEKENE DYEIEKDLKG TIDEKKMTKK KKKISEVKIE GEHDELRLKR RRKSSRDKIE 240 ESDNKSTYKV RMNPRYHERI QRNNGSTTGT KPKFEATVWP CNLSSPYMNI PVEFSDTNGL 300 TEHNELTLMD PKGRLWQGFH RRLGRSSLGG APRRLIRGVV SRRQLHGSLP LAQGPQLPLA 360 PAPASVYLLI ASKHEERHTP RVQKLLLLME ENYTKEEALQ MESQVLSLLN FELTAPMPKC 420 FLSSLVNVVH EPPQLEFLAD FITELFLLEY HMLQYPPSMI AASSLFLARF VLWPKEHPWT 480 RRLTDYSFYQ PYELSNCVKD LFWAFVFSSG TRCFGCDL*

Sequence ? help Back to Top

Protein Sequence Length: 519 aa Download sequence

MMRKNGGPGN MHFFKPMLPG FSKKLAIPTA FVREIVKERC NVRTSTLVNP NGKSWRVDVY  60
EDHKKDYMYF SGNGWLRFVR AHKLGVGYFV VFCYKGNMVF KFRVYDLSAC EITSYASSDA  120
PRENFYNNKK KTNNENEKKK MKEKITVINV EEDEENFEDD DGDEVTESIE KRKKQQLKKI  180
SEVKFEKENE DYEIEKDLKG TIDEKKMTKK KKKISEVKIE GEHDELRLKR RRKSSRDKIE  240
ESDNKSTYKV RMNPRYHERI QRNNGSTTGT KPKFEATVWP CNLSSPYMNI PVEFSDTNGL  300
TEHNELTLMD PKGRLWQGFH RRLGRSSLGG APRRLIRGVV SRRQLHGSLP LAQGPQLPLA  360
PAPASVYLLI ASKHEERHTP RVQKLLLLME ENYTKEEALQ MESQVLSLLN FELTAPMPKC  420
FLSSLVNVVH EPPQLEFLAD FITELFLLEY HMLQYPPSMI AASSLFLARF VLWPKEHPWT  480
RRLTDYSFYQ PYELSNCVKD LFWAFVFSSG TRCFGCDL*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	171	213	KRKKQQLKKISEVKFEKENEDYEIEKDLKGTIDEKKMTKKKKK
2	209	232	KKKKKISEVKIEGEHDELRLKRRR
3	210	233	KKKKKISEVKIEGEHDELRLKRRR
4	211	234	KKKKKISEVKIEGEHDELRLKRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G31690.1	8e-16	B3 family protein