PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_07.335 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | WOX | ||||||||
Protein Properties | Length: 188aa MW: 21413.3 Da PI: 8.4881 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 47.2 | 3.8e-15 | 2 | 50 | 14 | 57 |
HHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 14 eLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +Lee++++ r+p+a+++++++++l +++ ++V++WFqN++a++++ evm.model.AsparagusV1_07.335 2 ILEEMYRSgVRTPNASQIQQITAHLsfygKIEGKNVFYWFQNHKARDRQ 50 8******99*************************************996 PP | |||||||
2 | Wus_type_Homeobox | 95 | 6.2e-31 | 1 | 51 | 14 | 64 |
Wus_type_Homeobox 14 kiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 +iLee+y+sG+rtPn+++iq+ita+L+ yGkie+kNVfyWFQN+kaR+rqk evm.model.AsparagusV1_07.335 1 MILEEMYRSGVRTPNASQIQQITAHLSFYGKIEGKNVFYWFQNHKARDRQK 51 69************************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 188 aa Download sequence |
MILEEMYRSG VRTPNASQIQ QITAHLSFYG KIEGKNVFYW FQNHKARDRQ KLRRRLSRQH 60 HLLHGCSFNQ YPLQTPNVQL FHNLEEASLS PTYSHLQAPL HFLHQGVPDQ ETSQGMNLLS 120 KLEKGEASPP KMSHGYDYMM MMMMESSHDA HPCCKPLKTL DLFPTKSTGL KDECSTSNPS 180 SCSTSTN* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28610.1 | 5e-24 | WOX family protein |