PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_07.3074
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family B3
Protein Properties Length: 315aa    MW: 35448.1 Da    PI: 8.9323
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_07.3074genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B340.45.1e-13561301897
                                    --HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
                             B3  18 lpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                                    l  +++++h g++    +  +l+++ gr+We+k+     ++++++++GW +F + n ++ gDf+vF +dg+ +f   vk+
  evm.model.AsparagusV1_07.3074  56 LIPPCFKKHlGKS--IMQRSVLRSSAGREWEIKM--GTVDEQIFFQDGWDRFISNNSINLGDFLVFFYDGDVGF--DVKI 129
                                    4445556774433..4456899************..999999****************************9888..6776 PP

                                    E CS
                             B3  97 f 97 
                                    +
  evm.model.AsparagusV1_07.3074 130 Y 130
                                    5 PP
2B351.32.1e-162132981099
                                    HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
                             B3  10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 
                                    ++ s+ +++p   a++++++ ++   + l+d++g sW+vkl+ + ++gr  l++GW++  k+n Lke+D +v+++++  +
  evm.model.AsparagusV1_07.3074 213 STPSCYMRIPAGLAKKYNLNMKN--SIDLRDPRGTSWSVKLS-TWCDGRLCLSSGWSDLYKENCLKERDACVLEFVQ-GG 288
                                    566899***********999666..5***************6.55667899***********************998.55 PP

                                    E..EEEEE-S CS
                             B3  90 felvvkvfrk 99 
                                    +  +v++fr+
  evm.model.AsparagusV1_07.3074 289 TLVNVHIFRA 298
                                    5579999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MHRLGFIPPL LPQHPLSLSL SLCVCVLFAQ MGKPKLMSMA APSFFKVMFG DFRTKLIPPC  60
FKKHLGKSIM QRSVLRSSAG REWEIKMGTV DEQIFFQDGW DRFISNNSIN LGDFLVFFYD  120
GDVGFDVKIY GTSCCEKRDE FDVKIEAESE EDYDAKRPTK VIRRKAKKIT VDKPEGSETC  180
YKIFRGAKVS DKAMKAACAF KSPHPHFVTT CKSTPSCYMR IPAGLAKKYN LNMKNSIDLR  240
DPRGTSWSVK LSTWCDGRLC LSSGWSDLYK ENCLKERDAC VLEFVQGGTL VNVHIFRAAD  300
HIAKSIPGSD MDQG*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31640.11e-21B3 family protein