PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_07.3073
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family B3
Protein Properties Length: 455aa    MW: 51654.5 Da    PI: 10.2716
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_07.3073genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3482.3e-1514101197
                                    EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EE CS
                             B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfv 80 
                                    ffkv+     ++++ l++p  f ++ g +  +    +l+++ gr+We+k+     +++++l++GW +F ++n +++gDf+
  evm.model.AsparagusV1_07.3073  14 FFKVM--LADFRTK-LRIPPCFKRHLGDSIVQ--RSVLRNSMGRKWEIKV--GIVDDQVLLQDGWGRFISDNSINSGDFL 86 
                                    77777..6666666.99**9997555544333..5799************..99999*********************** PP

                                    EEEE-SSSEE..EEEEE CS
                             B3  81 vFkldgrsefelvvkvf 97 
                                    vF +dg+++f   vk++
  evm.model.AsparagusV1_07.3073  87 VFFYDGDMGF--DVKIY 101
                                    ********99..77765 PP
2B356.55.2e-181902701599
                                    -EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
                             B3  15 rlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                                     +++p + a+ +++k ++   ++l d++g sW+vk++ ++++++  lt+GW++  k n+LkegD +vF++++  ++  +v
  evm.model.AsparagusV1_07.3073 190 GMRIPAELAKIYNLKVKN--SIVLVDPRGTSWSVKISTWGSGRQ-CLTSGWNSLYKKNRLKEGDACVFEFVH-GGAVVNV 265
                                    489******888887555..5***************99999877.59**********************998.6777899 PP

                                    EEE-S CS
                             B3  95 kvfrk 99 
                                    ++fr+
  evm.model.AsparagusV1_07.3073 266 HIFRA 270
                                    99997 PP
3B349.67.2e-163714531298
                                    HTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS
                             B3  12 ksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 
                                    +++r+++pkk ++e g++k +  + tl d+sg+sW+ ++++ ++ g++ l++GW +F + n+L  gD+++F++ g   + 
  evm.model.AsparagusV1_07.3073 371 RLHRVYIPKKVTQELGLVKDQ--QTTLIDPSGKSWRAYIRV-RSYGHVELRGGWCRFSRGNNLALGDVCIFEFFG-GAEY 446
                                    5799**************766..58899***********43.3334588***********************988.5555 PP

                                    .EEEEE- CS
                             B3  92 lvvkvfr 98 
                                     +v++fr
  evm.model.AsparagusV1_07.3073 447 IKVHIFR 453
                                    7999987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 455 aa     Download sequence    
MGKPKLISMA TPSFFKVMLA DFRTKLRIPP CFKRHLGDSI VQRSVLRNSM GRKWEIKVGI  60
VDDQVLLQDG WGRFISDNSI NSGDFLVFFY DGDMGFDVKI YGATCCEKRE GSEVKIEAES  120
EEGSIDKSST MKASRKKERE SRRSRPKKRN MCFKILRGVK ACEKALEAAC AFKSSHPHFV  180
TTCRRSPSLG MRIPAELAKI YNLKVKNSIV LVDPRGTSWS VKISTWGSGR QCLTSGWNSL  240
YKKNRLKEGD ACVFEFVHGG AVVNVHIFRA PEYRAKLISK SDQSTFGVLK CQETSNCWHA  300
AKSMDSYNIK SEIFLRVDDM KKVQHAENSM DSDNNKSERF LSVDDTKKAP NEAKSFKSTH  360
PTFVTVWRPS RLHRVYIPKK VTQELGLVKD QQTTLIDPSG KSWRAYIRVR SYGHVELRGG  420
WCRFSRGNNL ALGDVCIFEF FGGAEYIKVH IFRT*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1136147KKERESRRSRPK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31640.11e-24B3 family protein