PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_07.3072
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family B3
Protein Properties Length: 441aa    MW: 49549.9 Da    PI: 9.9804
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_07.3072genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B345.71.2e-14221011197
                                    HHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
                             B3  11 lksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 
                                    ++++ l++p  f  +h g+k+ +    +l+++ gr+We+k+     ++++++++GW +F ++n ++ gDf+vF +dg+ +
  evm.model.AsparagusV1_07.3072  22 FRTS-LRIPTCFE-KHfGEKPMR--RSVLRSSAGRKWEIKM--GTVGDQVFFQDGWGRFISDNSINFGDFLVFFYDGDVG 95 
                                    4444.89998885.663655555..5899************..999999***************************9988 PP

                                    E..EEEEE CS
                             B3  90 felvvkvf 97 
                                    f   vk++
  evm.model.AsparagusV1_07.3072  96 F--DVKIY 101
                                    8..67665 PP
2B357.13.3e-181982781599
                                    -EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
                             B3  15 rlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                                     +++p + +++++++ ++   ++l+d++g sW++kl+ ++  g+  lt+GW++F + n+LkegD +v++l++  +++ +v
  evm.model.AsparagusV1_07.3072 198 YMRIPAELVKKCNLDVKN--SIVLQDPRGTSWSIKLSTWGD-GHLRLTSGWSRFYNKNHLKEGDACVLELVQ-GGATINV 273
                                    689*********888655..5***************87777.5899************************98.89999** PP

                                    EEE-S CS
                             B3  95 kvfrk 99 
                                    ++fr+
  evm.model.AsparagusV1_07.3072 274 HIFRS 278
                                    **996 PP
3B344.52.8e-143534331599
                                    -EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
                             B3  15 rlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                                    r+ +pkk a+e g++k +  + +l d+sg+sW+  +  + +  + + l+ GW++F + n+L +gD+++F++ g   +  +
  evm.model.AsparagusV1_07.3072 353 RVNIPKKLAQELGLVKDQ--ETILIDSSGKSWSADI--SVRTTGlVELGVGWSHFSRGNNLASGDVCIFEFFG-GAEYIK 427
                                    578************655..8999************..444444488***********************988.555579 PP

                                    EEEE-S CS
                             B3  94 vkvfrk 99 
                                    v++fr+
  evm.model.AsparagusV1_07.3072 428 VHIFRA 433
                                    999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 441 aa     Download sequence    
MGKPKLLSMA TPSFFKVMFG DFRTSLRIPT CFEKHFGEKP MRRSVLRSSA GRKWEIKMGT  60
VGDQVFFQDG WGRFISDNSI NFGDFLVFFY DGDVGFDVKI YGATCCEKAV EFEVKIEAES  120
ESECSDYKSP VNPGSDPLKV GRNKKARKSK EITAEKSKMC YKVIRGAKVS DKAIKAACSF  180
RSPHPHFVTS CRSSPTFYMR IPAELVKKCN LDVKNSIVLQ DPRGTSWSIK LSTWGDGHLR  240
LTSGWSRFYN KNHLKEGDAC VLELVQGGAT INVHIFRSAE YRTKSIPQSG ERFLNVDDMR  300
KVQHARKSMG SDNIKSERFL SIDVMKKVPK EAESFKSRHP TLVIVWRPSL FYRVNIPKKL  360
AQELGLVKDQ ETILIDSSGK SWSADISVRT TGLVELGVGW SHFSRGNNLA SGDVCIFEFF  420
GGAEYIKVHI FRAGETNTAN *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00260.14e-27B3 family protein